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- Bioinformatics, a practical guide to the analysis of Genes and Proteins. Baxevanis A, Ouellette F. 2001. Second Edition. Wiley Interscience.
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- Biological Sequence analysis, probabilistic models of proteins and nucleic acids. Durbin R, Eddy S, Krogh A. Mitchison G. 2002. Cambridge University Press.
- Computational Molecular Biology: An Algorithmic Approach. Pevzner, P. (2000) The MIT Press.
- An Introduction to Systems Biology: Design Principles of Biological Circuits, Uri Alon (2007)
- Complex Systems Science in Biomedicine by Thomas Deisboeck and J. Yasha Kresh ( 2006)
- The Mathematical Theory of Communication by Claude E Shannon and Warren Weaver (1971)
- The Structure and Dynamics of Networks by Mark Newman, Albert-László Barabási and Duncan J. Watts ( 2006)
